Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1cO08604 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1cO08604 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1cO08604 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Raet1cO08604 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.54□□□□□ -0.4
Raet1cO08604 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.54□□□□□ -0.4
Raet1cO08604 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Mir449b-201ENSMUST00000104833 80 ntBASIC12.54□□□□□ -0.4
Raet1cO08604 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Raet1cO08604 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.54□□□□□ -0.4
Raet1cO08604 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Raet1cO08604 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Raet1cO08604 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.54□□□□□ -0.4
Raet1cO08604 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.54□□□□□ -0.4
Raet1cO08604 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1cO08604 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.54□□□□□ -0.4
Raet1cO08604 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Raet1cO08604 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Raet1cO08604 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Raet1cO08604 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Raet1cO08604 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1cO08604 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1cO08604 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1cO08604 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Raet1cO08604 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Raet1cO08604 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
Raet1cO08604 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Gm44608-201ENSMUST00000206827 855 ntBASIC12.53□□□□□ -0.4
Raet1cO08604 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.53□□□□□ -0.4
Raet1cO08604 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.53□□□□□ -0.4
Raet1cO08604 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Mir125a-201ENSMUST00000083545 68 ntBASIC12.53□□□□□ -0.4
Raet1cO08604 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Raet1cO08604 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1cO08604 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Raet1cO08604 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1cO08604 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1cO08604 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.52□□□□□ -0.4
Raet1cO08604 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1cO08604 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1cO08604 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1cO08604 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms