Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh9F8VPK8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gm2756-201ENSMUST00000195851 400 ntBASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh9F8VPK8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gm13823-201ENSMUST00000119930 345 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 AA543401-201ENSMUST00000164248 1269 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh9F8VPK8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm13365-201ENSMUST00000121188 973 ntBASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm37935-201ENSMUST00000192012 982 ntBASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms