Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim30bE9PVL6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim30bE9PVL6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim30bE9PVL6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.9□□□□□ -0.02
Trim30bE9PVL6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim30bE9PVL6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim30bE9PVL6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Mir1938-201ENSMUST00000158746 100 ntBASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim30bE9PVL6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm8652-201ENSMUST00000181363 964 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm29741-201ENSMUST00000192667 421 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim30bE9PVL6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim30bE9PVL6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms