Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Gm2445-201ENSMUST00000182798 989 ntBASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Gm5878E9PUB3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Gm5878E9PUB3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gm12260-201ENSMUST00000122447 411 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Rprl2-201ENSMUST00000157150 290 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 AA543401-201ENSMUST00000164248 1269 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm5878E9PUB3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm5878E9PUB3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms