Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Gm25668-201ENSMUST00000157700 129 ntBASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Gm37489-201ENSMUST00000191883 159 ntBASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm11964-201ENSMUST00000120982 444 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm44069-201ENSMUST00000204898 506 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Mospd4-201ENSMUST00000180618 576 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hfm1D3Z4R1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hfm1D3Z4R1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm2231-201ENSMUST00000125661 612 ntBASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm8337-201ENSMUST00000187358 1938 ntBASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hfm1D3Z4R1 Gm14608-201ENSMUST00000120030 1553 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Gm12176-201ENSMUST00000121420 875 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Gm16479-201ENSMUST00000121706 932 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Gm24548-201ENSMUST00000158650 108 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Rps4l-202ENSMUST00000204242 789 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hfm1D3Z4R1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hfm1D3Z4R1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms