Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccnb1ip1D3Z3K2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccnb1ip1D3Z3K2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccnb1ip1D3Z3K2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm15794-201ENSMUST00000120182 631 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm7506-201ENSMUST00000207758 815 ntBASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccnb1ip1D3Z3K2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccnb1ip1D3Z3K2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms