Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.56□□□□□ -0.4
Shank1D3YZU1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.56□□□□□ -0.4
Shank1D3YZU1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shank1D3YZU1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.55□□□□□ -0.4
Shank1D3YZU1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.55□□□□□ -0.4
Shank1D3YZU1 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.55□□□□□ -0.4
Shank1D3YZU1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shank1D3YZU1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Gm4804-201ENSMUST00000182234 999 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Gm5370-201ENSMUST00000187187 574 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.54□□□□□ -0.4
Shank1D3YZU1 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.54□□□□□ -0.4
Shank1D3YZU1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms