Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Gm17971-201ENSMUST00000190239 806 ntBASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Gm7977-201ENSMUST00000193787 748 ntBASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav12d-1A0N8R0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav12d-1A0N8R0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav12d-1A0N8R0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms