Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm37230-201ENSMUST00000194491 818 ntBASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mir5126-201ENSMUST00000175513 77 ntBASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm27301-201ENSMUST00000184012 127 ntBASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms