Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.49□□□□□ -0.57
Trav18A0A075B656 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm18206-201ENSMUST00000207027 926 ntBASIC11.49□□□□□ -0.57
Trav18A0A075B656 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.49□□□□□ -0.57
Trav18A0A075B656 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav18A0A075B656 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.48□□□□□ -0.57
Trav18A0A075B656 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.48□□□□□ -0.57
Trav18A0A075B656 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.48□□□□□ -0.57
Trav18A0A075B656 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.48□□□□□ -0.57
Trav18A0A075B656 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav18A0A075B656 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms