Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5-4A0A075B652 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5-4A0A075B652 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm10275-202ENSMUST00000168697 495 ntBASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm10275-201ENSMUST00000092620 635 ntBASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5-4A0A075B652 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms