Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav8-1A0A075B641 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav8-1A0A075B641 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gm15794-201ENSMUST00000120182 631 ntBASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav8-1A0A075B641 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav8-1A0A075B641 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms