Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Gm38294-201ENSMUST00000192831 381 ntBASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn13Q9Z0S4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Gm28630-201ENSMUST00000187806 498 ntBASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn13Q9Z0S4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm27622-201ENSMUST00000183779 60 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm29310-201ENSMUST00000185468 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm21825-201ENSMUST00000185728 696 ntBASIC12.53□□□□□ -0.4
Cldn13Q9Z0S4 Gm29109-201ENSMUST00000185895 696 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms