Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.02□□□□□ -0.33
Cdh20Q9Z0M3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Gm7774-201ENSMUST00000200064 533 ntBASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh20Q9Z0M3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gm13517-201ENSMUST00000120782 1495 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Mir449b-201ENSMUST00000104833 80 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gm26308-201ENSMUST00000157768 69 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gm43575-201ENSMUST00000196420 516 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Gm5779-201ENSMUST00000218467 910 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 AC139350.3-201ENSMUST00000226151 420 ntBASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh20Q9Z0M3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Gm23935-201ENSMUST00000102303 57 ntBASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Gm24270-201ENSMUST00000102326 57 ntBASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Gm24245-201ENSMUST00000157318 57 ntBASIC12.99□□□□□ -0.33
Cdh20Q9Z0M3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms