Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Atp6ap1Q9R1Q9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atp6ap1Q9R1Q9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atp6ap1Q9R1Q9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atp6ap1Q9R1Q9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms