Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Gm5682-201ENSMUST00000173402 505 ntBASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rnf4Q9QZS2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Gm45747-201ENSMUST00000212203 999 ntBASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf4Q9QZS2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gm27704-201ENSMUST00000185094 107 ntBASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms