Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm9726-201ENSMUST00000180321 678 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim39Q9ESN2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim39Q9ESN2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gm8749-201ENSMUST00000117737 331 ntBASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gm10175-201ENSMUST00000086013 645 ntBASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim39Q9ESN2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim39Q9ESN2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim39Q9ESN2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim39Q9ESN2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim39Q9ESN2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms