Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Gm9794-201ENSMUST00000202370 423 ntBASIC16.66■□□□□ 0.26
Ube3bQ9ES34 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.66■□□□□ 0.26
Ube3bQ9ES34 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.66■□□□□ 0.26
Ube3bQ9ES34 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ube3bQ9ES34 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm12490-201ENSMUST00000120255 560 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm2445-201ENSMUST00000182798 989 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm27772-201ENSMUST00000184900 187 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm43094-201ENSMUST00000196549 921 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube3bQ9ES34 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Ube3bQ9ES34 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ube3bQ9ES34 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gm19078-201ENSMUST00000206311 727 ntBASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube3bQ9ES34 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms