Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tubb3Q9ERD7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm8410-201ENSMUST00000117225 605 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm6415-201ENSMUST00000118488 348 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm18049-201ENSMUST00000208909 581 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tubb3Q9ERD7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb3Q9ERD7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb3Q9ERD7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb3Q9ERD7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms