Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Gm12241-201ENSMUST00000118330 726 ntBASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-4Q9EQM3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Gm10268-201ENSMUST00000085340 555 ntBASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-4Q9EQM3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Mir686-201ENSMUST00000102174 109 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm37259-201ENSMUST00000193903 849 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-4Q9EQM3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms