Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm24196-201ENSMUST00000179161 110 ntBASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Gm5276-201ENSMUST00000196683 1047 ntBASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf1Q9EPU4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm17794-201ENSMUST00000220252 955 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm5687-201ENSMUST00000118252 640 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm18473-201ENSMUST00000220543 868 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.17■□□□□ 0.66
Cpsf1Q9EPU4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf1Q9EPU4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Gm12928-201ENSMUST00000117115 573 ntBASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Gm10012-201ENSMUST00000078252 192 ntBASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf1Q9EPU4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cpsf1Q9EPU4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.14■□□□□ 0.66
Cpsf1Q9EPU4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cpsf1Q9EPU4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm15371-201ENSMUST00000117057 784 ntBASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm13612-201ENSMUST00000119276 390 ntBASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm11814-201ENSMUST00000119515 929 ntBASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf1Q9EPU4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms