Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4cQ9D7F7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Gm8000-201ENSMUST00000188378 592 ntBASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp4cQ9D7F7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Gm11543-201ENSMUST00000120758 370 ntBASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Gm6443-201ENSMUST00000203599 874 ntBASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4cQ9D7F7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gm13365-201ENSMUST00000121188 973 ntBASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4cQ9D7F7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms