Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Gm44719-201ENSMUST00000206404 149 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb4aQ9D6F9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gm2445-201ENSMUST00000182798 989 ntBASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gm17807-201ENSMUST00000186869 298 ntBASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb4aQ9D6F9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm16026-204ENSMUST00000162652 683 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb4aQ9D6F9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms