Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Gm12585-201ENSMUST00000117307 290 ntBASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Mir7085-201ENSMUST00000184353 66 ntBASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf115Q9D0C1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Gm17150-201ENSMUST00000165577 381 ntBASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Gm9899-201ENSMUST00000065519 555 ntBASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf115Q9D0C1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Mir6392-201ENSMUST00000184924 108 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Gm6266-201ENSMUST00000203844 806 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf115Q9D0C1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms