Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smurf1Q9CUN6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm15173-201ENSMUST00000122049 433 ntBASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Smurf1Q9CUN6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Smurf1Q9CUN6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gm7787-201ENSMUST00000216858 688 ntBASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.77□□□□□ -0.37
Smurf1Q9CUN6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smurf1Q9CUN6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms