Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldnd1Q9CQX5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm26083-201ENSMUST00000157904 193 ntBASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm4271-201ENSMUST00000174444 973 ntBASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm18935-201ENSMUST00000212692 664 ntBASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldnd1Q9CQX5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Mir877-201ENSMUST00000104738 85 ntBASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Gm5161-201ENSMUST00000075243 853 ntBASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldnd1Q9CQX5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldnd1Q9CQX5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Gm38341-201ENSMUST00000195357 515 ntBASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Cts7-204ENSMUST00000225321 1257 ntBASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms