Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm11950-201ENSMUST00000121615 838 ntBASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Gm5184-201ENSMUST00000220417 1702 ntBASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rpl39lQ9CQD0 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm10013-201ENSMUST00000106074 672 ntBASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm15794-201ENSMUST00000120182 631 ntBASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rpl39lQ9CQD0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Gm6345-202ENSMUST00000180900 204 ntBASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.11□□□□□ -0.95
Rpl39lQ9CQD0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms