Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trim34aQ99PP6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm27847-201ENSMUST00000183711 107 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm27375-201ENSMUST00000183799 107 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim34aQ99PP6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm45784-201ENSMUST00000188360 142 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm29741-201ENSMUST00000192667 421 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim34aQ99PP6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Gm38223-201ENSMUST00000194484 695 ntBASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Gm7561-201ENSMUST00000211203 886 ntBASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim34aQ99PP6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim34aQ99PP6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms