Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Gm44608-201ENSMUST00000206827 855 ntBASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Gm18057-201ENSMUST00000208220 503 ntBASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap3Q99LM2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Gm15957-201ENSMUST00000118893 974 ntBASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Gm45612-201ENSMUST00000211320 160 ntBASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap3Q99LM2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms