Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.54■□□□□ 0.24
Col20a1Q923P0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.54■□□□□ 0.24
Col20a1Q923P0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.54■□□□□ 0.24
Col20a1Q923P0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.53■□□□□ 0.24
Col20a1Q923P0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.53■□□□□ 0.24
Col20a1Q923P0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col20a1Q923P0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.52■□□□□ 0.24
Col20a1Q923P0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.52■□□□□ 0.24
Col20a1Q923P0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Gm43433-201ENSMUST00000196573 481 ntBASIC16.52■□□□□ 0.24
Col20a1Q923P0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.52■□□□□ 0.24
Col20a1Q923P0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.52■□□□□ 0.24
Col20a1Q923P0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col20a1Q923P0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.52■□□□□ 0.23
Col20a1Q923P0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col20a1Q923P0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.51■□□□□ 0.23
Col20a1Q923P0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.51■□□□□ 0.23
Col20a1Q923P0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms