Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm8000-201ENSMUST00000188378 592 ntBASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm18057-201ENSMUST00000208220 503 ntBASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb4Q91XZ6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gm18737-201ENSMUST00000173594 937 ntBASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb4Q91XZ6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb4Q91XZ6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb4Q91XZ6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms