Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gm2810-201ENSMUST00000118681 990 ntBASIC14.53□□□□□ -0.08
Trim60Q8VI40 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.53□□□□□ -0.08
Trim60Q8VI40 AW822252-206ENSMUST00000208904 237 ntBASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim60Q8VI40 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim60Q8VI40 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim60Q8VI40 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.52□□□□□ -0.09
Trim60Q8VI40 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gm18057-201ENSMUST00000208220 503 ntBASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.52□□□□□ -0.09
Trim60Q8VI40 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.52□□□□□ -0.09
Trim60Q8VI40 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim60Q8VI40 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm12260-201ENSMUST00000122447 411 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm38225-201ENSMUST00000194001 393 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 AA619741-201ENSMUST00000195095 646 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm20553-201ENSMUST00000204205 844 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.51□□□□□ -0.09
Trim60Q8VI40 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim60Q8VI40 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms