Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.48□□□□□ -0.25
Lsm1Q8VC85 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm6222-201ENSMUST00000120787 396 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm25911-201ENSMUST00000157621 56 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm1Q8VC85 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm13015-201ENSMUST00000118674 204 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm13823-201ENSMUST00000119930 345 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 AA619741-201ENSMUST00000195095 646 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm1Q8VC85 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms