Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Gm27622-201ENSMUST00000183779 60 ntBASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3c5Q8R2T8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3c5Q8R2T8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 BC001981-202ENSMUST00000191393 1545 ntBASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Gm24543-201ENSMUST00000103867 82 ntBASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3c5Q8R2T8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm8410-201ENSMUST00000117225 605 ntBASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm15957-201ENSMUST00000118893 974 ntBASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm14767-201ENSMUST00000121559 586 ntBASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Gm27631-201ENSMUST00000184163 466 ntBASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3c5Q8R2T8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms