Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm29741-201ENSMUST00000192667 421 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm6983-201ENSMUST00000214912 628 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp7Q8R1T1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp7Q8R1T1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm8652-201ENSMUST00000181363 964 ntBASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp7Q8R1T1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm12957-201ENSMUST00000117835 377 ntBASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm13226-201ENSMUST00000117838 404 ntBASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm45841-201ENSMUST00000207700 164 ntBASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp7Q8R1T1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.87■□□□□ 0.45
Chmp7Q8R1T1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms