Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp40Q8R1F9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.03■□□□□ -0
Rpp40Q8R1F9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp40Q8R1F9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm15240-201ENSMUST00000118156 720 ntBASIC15.02■□□□□ -0
Rpp40Q8R1F9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm7063-201ENSMUST00000186840 981 ntBASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Gm5425-201ENSMUST00000214125 459 ntBASIC15.02■□□□□ -0
Rpp40Q8R1F9 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.02■□□□□ -0
Rpp40Q8R1F9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rpp40Q8R1F9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp40Q8R1F9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm12859-201ENSMUST00000117834 427 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm13385-201ENSMUST00000121089 220 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm8927-201ENSMUST00000181978 981 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm29741-201ENSMUST00000192667 421 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm17795-201ENSMUST00000214505 757 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm3222-201ENSMUST00000071282 990 ntBASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms