Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc12Q8K5B8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm15487-201ENSMUST00000122373 465 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm44608-201ENSMUST00000206827 855 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc12Q8K5B8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm7488-201ENSMUST00000117148 684 ntBASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm15957-201ENSMUST00000118893 974 ntBASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm28631-201ENSMUST00000190740 334 ntBASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm5425-201ENSMUST00000214125 459 ntBASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc12Q8K5B8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms