Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm7029-201ENSMUST00000173226 450 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm37497-201ENSMUST00000195830 798 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gm10146-201ENSMUST00000072739 309 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx54Q8K4L0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gm4935-201ENSMUST00000221316 1198 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Gm24447-201ENSMUST00000083977 338 ntBASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx54Q8K4L0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm6023-201ENSMUST00000118217 606 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 B9d1os-201ENSMUST00000137010 674 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm16379-201ENSMUST00000161469 348 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm6222-202ENSMUST00000182143 629 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm8762-201ENSMUST00000193486 339 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx54Q8K4L0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ddx54Q8K4L0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx54Q8K4L0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms