Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cchcr1Q8K2I2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Gm45453-201ENSMUST00000211758 853 ntBASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cchcr1Q8K2I2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Gm13365-201ENSMUST00000121188 973 ntBASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cchcr1Q8K2I2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm13015-201ENSMUST00000118674 204 ntBASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cchcr1Q8K2I2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms