Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.22■□□□□ 0.19
Rtn1Q8K0T0 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 CT009738.1-201ENSMUST00000219031 809 ntBASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtn1Q8K0T0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Rtn1Q8K0T0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Gm27306-201ENSMUST00000183970 107 ntBASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.2■□□□□ 0.18
Rtn1Q8K0T0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms