Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Mir1895-201ENSMUST00000122615 79 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm26308-201ENSMUST00000157768 69 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm10275-202ENSMUST00000168697 495 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm27494-201ENSMUST00000184735 189 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm10275-201ENSMUST00000092620 635 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc87Q8CDL9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc87Q8CDL9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Rpph1-201ENSMUST00000175096 319 ntBASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Chchd1-203ENSMUST00000224633 557 ntBASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc87Q8CDL9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms