Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Gm43908-201ENSMUST00000205074 1472 ntBASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Gm19221-201ENSMUST00000221827 1477 ntBASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Pabpn1Q8CCS6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm3096-201ENSMUST00000185770 364 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm8365-201ENSMUST00000197334 648 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm9004-201ENSMUST00000218739 1222 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm4366-201ENSMUST00000201488 1342 ntBASIC21.29■■□□□ 1
Pabpn1Q8CCS6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm7666-201ENSMUST00000146631 819 ntBASIC21.28■■□□□ 1
Pabpn1Q8CCS6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm2546-201ENSMUST00000182630 991 ntBASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Gm25517-201ENSMUST00000083865 134 ntBASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pabpn1Q8CCS6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Gm18734-201ENSMUST00000172937 808 ntBASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Gm7003-201ENSMUST00000195089 312 ntBASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
Pabpn1Q8CCS6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC21.27■□□□□ 0.99
Pabpn1Q8CCS6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pabpn1Q8CCS6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Gm8913-201ENSMUST00000209491 641 ntBASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Dhrs4-202ENSMUST00000226168 828 ntBASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pabpn1Q8CCS6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms