Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm44608-201ENSMUST00000206827 855 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a6Q8C6K9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm27501-201ENSMUST00000183599 107 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm3786-201ENSMUST00000202659 378 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Col6a6Q8C6K9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms