Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tsen54Q8C2A2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tsen54Q8C2A2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tsen54Q8C2A2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Gm1401-201ENSMUST00000122048 772 ntBASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Gm8318-201ENSMUST00000182954 872 ntBASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tsen54Q8C2A2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tsen54Q8C2A2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms