Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Gm5479-201ENSMUST00000160578 435 ntBASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ube3dQ8BX13 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm7063-201ENSMUST00000186840 981 ntBASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm29541-201ENSMUST00000191351 678 ntBASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.5□□□□□ -0.41
Ube3dQ8BX13 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ube3dQ8BX13 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm27618-201ENSMUST00000183671 60 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm17837-201ENSMUST00000186435 985 ntBASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ube3dQ8BX13 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms