Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.4□□□□□ -0.42
SprnQ8BWU1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SprnQ8BWU1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SprnQ8BWU1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm16198-201ENSMUST00000118766 670 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm13597-201ENSMUST00000121239 375 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Mir8117-201ENSMUST00000184773 107 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.39□□□□□ -0.43
SprnQ8BWU1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SprnQ8BWU1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SprnQ8BWU1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms