Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp43Q8BUM9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp43Q8BUM9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Gm15460-201ENSMUST00000118147 391 ntBASIC14.22□□□□□ -0.13
Usp43Q8BUM9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Gm9229-201ENSMUST00000222777 126 ntBASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp43Q8BUM9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Gm27680-201ENSMUST00000184192 160 ntBASIC14.21□□□□□ -0.13
Usp43Q8BUM9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp43Q8BUM9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.21□□□□□ -0.14
Usp43Q8BUM9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp43Q8BUM9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp43Q8BUM9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms