Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdhr3Q8BL00 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gm20553-201ENSMUST00000204205 844 ntBASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdhr3Q8BL00 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gm9727-201ENSMUST00000161387 555 ntBASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gm18733-201ENSMUST00000173950 856 ntBASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Grk6-205ENSMUST00000224653 2976 ntBASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms