Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Dupd1-202ENSMUST00000224735 548 ntBASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 BC001981-202ENSMUST00000191393 1545 ntBASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srrm4Q8BKA3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Gm12882-201ENSMUST00000121696 517 ntBASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Mir1897-201ENSMUST00000122581 272 ntBASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Srrm4Q8BKA3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm14767-201ENSMUST00000121559 586 ntBASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm27680-201ENSMUST00000184192 160 ntBASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm20949-201ENSMUST00000206478 952 ntBASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms