Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp2bQ8BJF9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Gm6973-201ENSMUST00000117080 721 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.4□□□□□ -0.1
Chmp2bQ8BJF9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chmp2bQ8BJF9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2bQ8BJF9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms